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Fig. 2 | Algorithms for Molecular Biology

Fig. 2

From: Exact transcript quantification over splice graphs

Fig. 2

Graph Salmon and Salmon give different PSI estimates in an example of BD RNA-seq sample. a Network flow of BD 1 and control 3 samples estimated by Graph Salmon. The subgraph includes exons 1, 3 to 7, and exons are represented by nodes and the node label indicates the index of exon. PSI of inclusion of exon 6 between exon 3 and 7 is computed. Edges involved in the PSI calculation are solid; the rest are dashed. b Network flow of the same samples computed by Salmon with reference transcripts

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