|
Varification parameters
|
Compl.[%]
|
#ctg
|
#MA
|
|---|
|
Direction
|
80.13
|
608
|
111
|
|
Direction + offset
|
80.08
|
622
|
103
|
|
Direction + offset + incomplete mapping
|
80.04
|
1263
|
121
|
|
No mapping
|
80.15
|
801
|
113
|
- Overlaps are indicated by anchors and evaluated by pairwise long-read alignments. They are considered valid if: the relative direction suggested by the anchor matches that of the pairwise alignment (direction); the offset is sufficiently similar for both methods (offset); at least 75% of the overlap is found as direct alignment (incomplete mapping); the overlap indicated by the anchor is less than or equal to 1 kbp or a pairwise alignment is possible (no mapping). Column descriptions: completeness of the assembly, #ctg: number of contigs, #MA: number of mis-assemblies (breakpoints relative to the reference assembly)
