Table 1 The riboswitch sequences
Riboswitch | add_Adenine | xpt_Guanine | mtgE_Mg | lysC_Lysine | VEGFA | yitJ_SAM |
|---|---|---|---|---|---|---|
Abbr | add | xpt | mgt | lys | VEGFA | sam |
Length | 147 | 162 | 213 | 243 | 125 | 170 |
Class | Adenine | Guanine | Magnesium | Lysine | Het. nuclear ribonucleoprotein L | S-Adenosylmethionine |
Organism | Vibrio vulnificus | Bacillus subtilis | Bacillus subtilis | Bacillus subtilis | Homosapiens | Bacillus subtilis |
Function | Translation | Transcription | Transcription | Transcription | Alt. Splicing | Transcription |
Energy on (kcal/mol) | − 92.90 | − 94.61 | − 150.00 | − 148.05 | − 89.18 | − 78.76 |
Energy off (kcal/mol) | − 99.90 | − 109.80 | − 135.80 | − 166.56 | − 55.20 | − 93.70 |
Reference | [24] | [53] | [54] | [55] | [56] | [57] |