Table 1 Top ranking PQ-trees for which tree-guided rearrangements were found in plasmids
From: Approximate search for known gene clusters in new genomes using PQ-trees
| Â | PQ-Treea | S-score | # Genomesb | Functional Category |
|---|---|---|---|---|
1 | [[0683 [[0411 0410] [0559 4177]]] 0583] | 22.5 | 5 (2) | Amino acid transport |
2 | (1609 [1653 1175 0395] 3839) | 10.0 | 10 (2) | Carbohydrate transport |
3 | [[1538 [3696 0845]] [0642 0745]] | 7.5 | 7 (1) | Heavy metal efflux |
4 | [[2115 1070] [4213 [1129 4214]]] | 7.5 | 1 (1) | Carbohydrate transport |
5 | [1960 [[2011 1135] [2141 1464]]] | 7.5 | 3 (1) | Amino acid transport |
6 | [[0596 0599] [[3485 3485] 0015]] | 7.5 | 9 (1) | Metabolism |
7 | [[[1129 1172 1172] 1879] 3254] | 7.5 | 6 (1) | Carbohydrate transport |
8 | (1609 1869 [[1129 1172] 1879] 0524) | 7.5 | 1 (1) | Carbohydrate transport |
9 | (0683 [0559 4177] [0411 0410] 0318) | 7.5 | 1 (1) | Amino acid transport |
10 | (3839 0673 [[0395 1175] 1653]) | 5.0 | 10 (1) | Carbohydrate transport |