Table 1 Running time performance of BISER (single-core and 8-core mode) on Intel Xeon 8260 CPU at 2.40 GHz for single genomes (hg19 and mm8)
From: Fast characterization of segmental duplication structure in multiple genome assemblies
Single genome (hg19) | Total (min) | Putative SDs (min) | Alignment (min) |
|---|---|---|---|
1 core | 54 | 21 | 33 |
8 cores | 7 | 3 | 4 |
Single genome (mm8) | Total | Putative SDs (min) | Alignment (min) |
|---|---|---|---|
1 core | 1 h 24 min | 20 | 64 |
8 cores | 11 min | 3 | 9 |