Fig. 12
From: Constructing founder sets under allelic and non-allelic homologous recombination
Graphical representation of the variation graph for the 1p36.13 locus data. On the left, a 2D plot rendered by Bandage [43]. Markers are represented as numbered colored rectangles, and the undirected edges connecting them as black curves. Markers 1 and 8 correspond respectively to the source and the sink of the graph. The right plot shows the walk through the graph from source (blue) to sink (red) corresponding to the sequence of haplotype AFR-NA19036-h1, a sample of African origin from our experimental data. The sample’s sequence in the previously established notation is: \({ \texttt {123}\overline{\texttt {4}}{} \texttt {56}\overline{\texttt {5432}}{} \texttt {7}\overline{\texttt {32432}}{} \texttt {78}}\)