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Table 1 Toy example of input data

From: Global exact optimisations for chloroplast structural haplotype scaffolding

Contig set

Link set

Contig

Mult

Wex

Contig

Orient

Contig

Orient

\(a\)

1

0.70

\(a\)

\(f\)

\(c\)

\(r\)

\(b\)

2

0.83

\(a\)

\(r\)

\(c\)

\(r\)

\(c\)

2

0.17

\(b\)

\(r\)

\(c\)

\(f\)

\(d\)

1

0.43

\(b\)

\(f\)

\(d\)

\(f\)

\(b\)

\(f\)

\(d\)

\(r\)

  1. Left: set of contigs \(\mathcal {C}{}\). Right: set of links \(\mathcal {L}{}\). For the sake of space, for no one of the links in the table, its reverse is given, although it belongs to \(\mathcal {L}{}\)