From: Global exact optimisations for chloroplast structural haplotype scaffolding
ILP | RepF | PRepF | ARepF | |
---|---|---|---|---|
\(\mathcal {DRP}\) | \(DirF\) | \(PDirF\) | \(ADirF\) | |
\(\mathcal {IRP}\) | \(InvF\) | \(PInvF\) | \(AInvF\) |
ILP | Forbid | Alpha | Repfrag | Repadj |
---|---|---|---|---|
\(\mathcal {DRP}\) | \(ForbidDR\) | \(AlphaDR\) | dirfrag | diradj |
\(\mathcal {IRP}\) | \(ForbidIR\) | \(AlphaIR\) | invfrag | invadj |