From: Global exact optimisations for chloroplast structural haplotype scaffolding
Successful | Quast | ||||||
---|---|---|---|---|---|---|---|
Instance | ILPs | Total | \(\textsf{SOC}\) | \(\textsf{SOR}\) | %gnm | #mis | |
Abies_alba | dr-sc | 1 | 0 | 0 | 99.879 | 3 | 0 |
ir-sc | 2 | 1 | 2 | 100.0 | 0 | 0 | |
Acorus_americanus | ir-sc | 2 | 1 | 2 | 99.987 | 0 | 0 |
Agathis_dammara | dr-ir-sc | 10 | 0 | 2 | 80.509 | 1 | 2 |
ir-dr-sc | 6 | 0 | 0 | 80.935 | 2 | 2 | |
Azima_tetracantha | ir-sc | 2 | 1 | 2 | 99.987 | 0 | 0 |
Begonia_pulchrifolia | – | – | – | – | – | – | – |
Carpodetus_serratus | ir-sc | 2 | 0 | 2 | 99.998 | 2 | 0 |
Circaeaster_agrestis | ir-sc | 2 | 1 | 2 | 99.987 | 0 | 0 |
Clematis_repens | ir-sc | 2 | 1 | 2 | 100.0 | 0 | 0 |
Commiphora_foliacea | ir-sc | 4 | 1 | 4 | 98.82 | 0 | 5 |
Cucumis_hystrix | ir-sc | 2 | 0 | 0 | 100.0 | 0 | 0 |
Eucommia_ulmoides | ir-sc | 2 | 1 | 2 | 99.988 | 0 | 2 |
Jasminum_tortuosum | ir-sc | 2 | 0 | 2 | 99.992 | 2 | 0 |
Juniperus_scopulorum | sc | 1 | 1 | 1 | 99.722 | 0 | 1 |
Lamprocapnos_spectabilis | dr-sc | 1 | 0 | 0 | 35.86 | 3 | 0 |
Lathyrus_pubescens | dr-sc | 1 | 0 | 0 | 98.471 | 2 | 2 |
ir-sc | 2 | 0 | 2 | 98.496 | 0 | 2 | |
Lophocereus_schottii | sc | 1 | 0 | 1 | 99.884 | 1 | 0 |
Musa_ornata | ir-sc | 2 | 1 | 2 | 99.97 | 0 | 2 |
Oenothera_glazioviana | ir-sc | 2 | 1 | 2 | 100.0 | 0 | 0 |
Pelargonium_nanum | ir-sc | 2 | 0 | 2 | 96.44 | 4 | 0 |
Podocarpus_totara | sc | 1 | 0 | 1 | 99.712 | 4 | 0 |
Porphyra_purpura | dr-sc | 1 | 1 | 1 | 100.0 | 0 | 0 |
Sagittaria_trifolia | ir-sc | 2 | 1 | 2 | 100.0 | 0 | 0 |
Sciadopitys_verticillata | dr-sc | 1 | 0 | 0 | 98.989 | 6 | 3 |
ir-sc | 2 | 1 | 2 | 98.997 | 1 | 4 | |
Sciaphila_densiflora | sc | 1 | 1 | 1 | 100.0 | 0 | 0 |
Selaginella_kraussiana | dr-sc | 1 | 1 | 1 | 100.0 | 0 | 0 |
Selaginella_vardei | dr-sc | 1 | 1 | 1 | 100.0 | 0 | 0 |
Taxus_baccata | sc | 1 | 1 | 1 | 99.767 | 0 | 2 |
Triosteum_pinnatifidum | ir-dr-sc | 2 | 0 | 2 | 99.278 | 0 | 2 |
Uvaria_macrophylla | ir-sc | 2 | 1 | 2 | 99.896 | 0 | 0 |
Welwitschia_mirabilis | ir-sc | 2 | 1 | 2 | 100.0 | 0 | 1 |
Wolffia_australiana | ir-sc | 4 | 1 | 4 | 99.988 | 0 | 0 |