Table 9 benchmark 3 v1 ilp stats
From: Global exact optimisations for chloroplast structural haplotype scaffolding
Instance | \(\mathsf {|{}\mathcal {C}{}|}\) | \(\mathsf {|{}\mathcal {L}{}|}\) | \(\mathsf {|{}V|}\) | \(\mathsf {|{}E|}\) | Time |
|---|---|---|---|---|---|
Abies_alba | 9 | 28 | 20 | 36 | 0.02 |
0.02 | |||||
Acorus_americanus | 5 | 16 | 16 | 40 | 0.04 |
0.05 | |||||
Agathis_dammara | 20 | 54 | 50 | 96 | 0.2 |
0.64 | |||||
Azima_tetracantha | 7 | 20 | 16 | 28 | 0.0 |
0.0 | |||||
Begonia_pulchrifolia | 6 | 14 | 12 | 14 | 0.0 |
0.0 | |||||
Carpodetus_serratus | 13 | 44 | 36 | 76 | 0.14 |
0.21 | |||||
Circaeaster_agrestis | 13 | 36 | 44 | 112 | 0.37 |
4.06 | |||||
Clematis_repens | 6 | 16 | 18 | 38 | 0.04 |
0.04 | |||||
Commiphora_foliacea | 16 | 38 | 38 | 58 | 0.04 |
0.04 | |||||
Cucumis_hystrix | 9 | 22 | 22 | 40 | 0.02 |
0.03 | |||||
Eucommia_ulmoides | 13 | 32 | 32 | 52 | 0.03 |
0.05 | |||||
Jasminum_tortuosum | 10 | 26 | 30 | 68 | 0.07 |
0.13 | |||||
Juniperus_scopulorum | 10 | 28 | 20 | 28 | 0.0 |
0.0 | |||||
Lamprocapnos_spectabilis | 12 | 36 | 26 | 46 | 0.0 |
0.0 | |||||
Lathyrus_pubescens | 17 | 44 | 36 | 52 | 0.02 |
0.02 | |||||
Lophocereus_schottii | 12 | 36 | 24 | 36 | 0.0 |
0.0 | |||||
Musa_ornata | 15 | 32 | 46 | 82 | 0.24 |
0.87 | |||||
Oenothera_glazioviana | 11 | 30 | 30 | 56 | 0.07 |
0.08 | |||||
Pelargonium_nanum | 11 | 32 | 34 | 108 | 0.17 |
0.43 | |||||
Podocarpus_totara | 13 | 42 | 26 | 42 | 0.0 |
0.03 | |||||
Porphyra_purpura | 3 | 8 | 8 | 16 | 0.0 |
0.0 | |||||
Sagittaria_trifolia | 15 | 32 | 34 | 46 | 0.17 |
0.02 | |||||
Sciadopitys_verticillata | 25 | 70 | 52 | 78 | 0.02 |
0.04 | |||||
Sciaphila_densiflora | 4 | 8 | 8 | 8 | 0.0 |
0.0 | |||||
Selaginella_kraussiana | 5 | 12 | 14 | 26 | 0.01 |
0.01 | |||||
Selaginella_vardei | 3 | 8 | 8 | 16 | 0.0 |
0.0 | |||||
Taxus_baccata | 17 | 42 | 34 | 42 | 0.0 |
0.0 | |||||
Triosteum_pinnatifidum | 13 | 40 | 32 | 66 | 0.07 |
0.15 | |||||
Uvaria_macrophylla | 13 | 30 | 42 | 86 | 0.24 |
0.84 | |||||
Welwitschia_mirabilis | 13 | 34 | 30 | 30 | 0.02 |
0.03 | |||||
Wolffia_australiana | 10 | 28 | 24 | 44 | 0.02 |
0.02 |