Table 1 Properties of four cyclic pangenome graphs used for evaluation
Graph | \(|{{V}} |\) | \(|{{E}} |\) | No. of weak components | No. of structural variants | N50 length of vertex labels (kb) |
|---|---|---|---|---|---|
10H | 283,296 | 406,292 | 30 | 61,523 | 225 |
40H | 679,846 | 978,122 | 28 | 149,163 | 127 |
80H | 1,106,286 | 1,594,980 | 26 | 244,372 | 85 |
95H | 1,224,853 | 1,765,222 | 26 | 270,888 | 79 |