Table 5 A comparison of the performance of long-read aligners using the 95H-DAG graph

Indexing time(sec)

78

77

62

276

575

Alignment time(sec)

2406

2515

50

5136

23710

Memory usage (GB)

30.04

25.61

24.79

26.12

185.83

Unaligned reads

1.62%

1.62%

2.23%

0%

0%

Incorrectly Aligned reads

1.28%

1.29%

1.92%

3.06%

4.93%

Unaligned reads (MQ\(\ge\)10)

4.75%

4.75%

6.26%

0.85%

0%

Incorrectly Aligned reads (MQ\(\ge\)10)

0.53%

0.54%

0.84%

2.41%

4.93%