Table 3 Changes to terms of \(F\) by operations of Algorithm 2
From: Recombinations, chains and caps: resolving problems with the DCJ-indel model
Step | \(-\Delta c_\circ\) | \(\Delta p_{a|b}\) | \(\Delta \max (p_{A\circ a},p_{B|a})\) | \(\Delta \max (p_{A|b},p_{B\circ b})\) | \(-\Delta p_{A|B}\) |
|---|---|---|---|---|---|
1 | 0 | 0 | − 1 | 0 | − 1 |
3 | 0 | 0 | 0 | − 1 | − 1 |
5 | 0 | 0 | − 2 | 0 | 0 |
7 | 0 | 0 | 0 | − 2 | 0 |
11 | 0 | − 1 | 0 | 0 | 0 |
12 | 0 | − 1 | − 1 | 0 | 0 |
13 | 0 | − 1 | − 1 | 0 | 0 |
14 | 0 | − 1 | 0 | 0 | 0 |
18 | 0 | − 2 | 0 | 0 | 0 |
22 | − 1 | 0 | 0 | 0 | 0 |