Table 2 We tabulate the results of the comparison between LinearFold and SparseRNAFolD V2.0 when given the SARS-COV-2 sequence of length 29,903 as input and using the “always dangle” model
From: SparseRNAfolD: optimized sparse RNA pseudoknot-free folding with dangle consideration
SparseRNAFolD V2.0 | LinearFold | |
|---|---|---|
Energy (kcal/mol) | − 8787.50 | − 8476.20 |
Run-time (s) | 1127.92 | 27.67 |
Memory: resident set size (KB) | 274,704 | 1,076,904 |