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Table 1 Parameters optimized during clustering

From: Protein sequence and structure alignments within one framework

Classification n disc n cont n total
sequence 20k 0 20k
structure 0 5k 5k
sequence + structure 20k 5k 25k
  1. For the three types of classification and for fragments of length k, n disc is the number of adjustable parameters associated with discrete distributions, n cont the number of adjustable parameters associated with continuous (multivariate Gaussian) distributions and n total the total number of adjustable parameters.